sc-toolbox

Warning

This package is not properly maintained. It was primarily used for in-house analyses at the Theislab and Schillerlab. Do not expect it to be well tested or documented. However, contributions are welcome and we will provide guidance if required.

Features

Create minimal containers for single-cell data analysis with Scanpy
API for advanced Scanpy based plots and analyses

Installation

You can install sc-toolbox via pip from PyPI:

$ pip install sc-toolbox

Usage

import sc_toolbox.api as sct

Please see the Usage documentation.

Credits

This package was created with cookietemple using cookiecutter based on Hypermodern_Python_Cookiecutter. Most scripts were developed by Meshal Ansari and the package was designed by Lukas Heumos.

License

schillerlab/sc-toolbox

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