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Index bam files with-c
flag if contig size exceeds 2 ** 29
#9570
Index bam files with-c
flag if contig size exceeds 2 ** 29
#9570
Conversation
sorry, I will send another commit, the binary.py is not merged! This is the file based on my 19.05 version. |
@galaxybot test this |
Thank you @FredericBGA! |
-c
flag is contig size exceeds 2 ** 29
-c
flag is contig size exceeds 2 ** 29
-c
flag is contig size exceeds 2 ** 29
-c
flag is contig size exceeds 2 ** 29
-c
flag if contig size exceeds 2 ** 29
It looks like this has added |
@dannon it seems that we also can not display BAM files anymore. |
@bgruening Yeah, I'm seeing the same thing. I'll spend some time on this tomorrow to try to sort out what's going on with the display. |
This is 98% based on @mvdbeek work (mvdbeek@e386b8d). Thank you!
Should close #6956
The limit seems to be 2**29 -1 (I still have issues with 2**30):
biostar