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1. fithic fithic Public

   Fit-Hi-C is a tool for assigning statistical confidence estimates to chromosomal contact maps produced by genome-wide genome architecture assays such as Hi-C.

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2. mustache mustache Public

   Multi-scale Detection of Chromatin Loops from Hi-C and Micro-C Maps using Scale-Space Representation

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3. dcHiC dcHiC Public

   dcHiC: Differential compartment analysis for Hi-C datasets

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4. FitHiChIP FitHiChIP Public

   Statistically Significant loops from HiChIP data

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5. ATACProc ATACProc Public

   ATAC-seq processing pipeline

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6. HiCnv HiCnv Public

   HiCnv is used to call copy number variations and breakpoints from Hi-C data

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