Archive Notice

Please note that this reposity is not actively maintained and is achived. Please check out the active celltalker repository at CilloLaboratory/celltalker.

celltalker

The goal of celltalker is to infer putative ligand and receptor interactions from single-cell RNAseq data. This is accomplished by evaluating known cognate ligand/receptor interactions across groups of cells. Interactions are scored by jointly weighting the expression levels of ligands and receptors, and significance is evaluated by comparing to a background distribution of scrambled ligands and receptors.

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arc85/celltalker

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