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Releases: BimberLab/DISCVRSeq

Version 1.3.86

15 Apr 14:54
@bbimber bbimber
1.3.86
45be707
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Version 1.3.86 Latest
Latest

What's Changed

  • Update GATK version and support --retainAllSources in MergeVcfsAndGenotypes by @bbimber in #373

Full Changelog: 1.3.85...1.3.86

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bbimber
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Version 1.3.85

14 Apr 17:00
@bbimber bbimber
1.3.85
db48274
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Version 1.3.85

What's Changed

  • Do not re-compute the offset for each contig in VcfToLuceneIndexer by @bbimber in #372
  • Bump docker/login-action from 3.3.0 to 3.4.0 by @dependabot in #371

Full Changelog: 1.3.84...1.3.85

Contributors

bbimber and dependabot
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Version 1.3.84

06 Mar 04:03
@bbimber bbimber
1.3.84
c456a33
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Version 1.3.84

What's Changed

Full Changelog: 1.3.83...1.3.84

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bbimber
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Version 1.3.83

03 Mar 21:04
@bbimber bbimber
1.3.83
3d32157
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Version 1.3.83

What's Changed

Full Changelog: 1.3.82...1.3.83

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bbimber
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Version 1.3.82

02 Mar 00:54
@bbimber bbimber
1.3.82
ad4d4a7
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Version 1.3.82

What's Changed

  • Bump docker/setup-buildx-action from 3.9.0 to 3.10.0 by @dependabot in #365
  • Bump docker/setup-qemu-action from 3.4.0 to 3.5.0 by @dependabot in #364
  • Bump docker/build-push-action from 6.13.0 to 6.15.0 by @dependabot in #363
  • Bump docker/setup-qemu-action from 3.5.0 to 3.6.0 by @dependabot in #366
  • Add Save10xBarcodes to store CB/UB combinations by @bbimber in #367

Full Changelog: 1.3.81...1.3.82

Contributors

bbimber and dependabot
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Version 1.3.81

16 Feb 20:06
@bbimber bbimber
1.3.81
a8a2d91
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Version 1.3.81

What's Changed

  • Update VariantConcordanceScore to exclude the input VCF from driving variants by @bbimber in #361
  • Bump docker/setup-qemu-action from 3.3.0 to 3.4.0 by @dependabot in #360
  • Bump docker/setup-buildx-action from 3.8.0 to 3.9.0 by @dependabot in #359

Full Changelog: 1.3.80...1.3.81

Contributors

bbimber and dependabot
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Version 1.3.80

04 Feb 20:47
@bbimber bbimber
1.3.80
e428c1d
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Version 1.3.80

What's Changed

  • Bugfix to SplitVcfBySamples when original header lacks depth by @bbimber in #358

Full Changelog: 1.3.79...1.3.80

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bbimber
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Version 1.3.79

03 Feb 02:00
@bbimber bbimber
1.3.79
56f5659
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Version 1.3.79

What's Changed

  • Bump docker/build-push-action from 6.9.0 to 6.10.0 by @dependabot in #350
  • Update lucene version by @bbimber in #352
  • Bump docker/setup-buildx-action from 3.7.1 to 3.8.0 by @dependabot in #351
  • Bump docker/build-push-action from 6.10.0 to 6.13.0 by @dependabot in #356
  • Bump docker/setup-qemu-action from 3.2.0 to 3.3.0 by @dependabot in #353
  • Improve SplitVcfBySamples to correctly handle allele-specific annotations by @bbimber in #357

Full Changelog: 1.3.78...1.3.79

Contributors

bbimber and dependabot
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Version 1.3.78

02 Nov 14:12
@bbimber bbimber
1.3.78
3f4d7eb
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Version 1.3.78

What's Changed

  • Allow AnnotateNovelSites to be run in a mode without a prior VCF by @bbimber in #348
  • Minor code cleanup in AnnotateNovelSites by @bbimber in #349

Full Changelog: 1.3.77...1.3.78

Contributors

bbimber
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Version 1.3.77

24 Oct 21:00
@bbimber bbimber
1.3.77
0a14e97
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Version 1.3.77

What's Changed

  • Bump docker/setup-buildx-action from 3.5.0 to 3.6.0 by @dependabot in #338
  • Bump docker/setup-buildx-action from 3.6.0 to 3.6.1 by @dependabot in #339
  • Bump docker/build-push-action from 6.5.0 to 6.6.1 by @dependabot in #341
  • Bump docker/build-push-action from 6.6.1 to 6.7.0 by @dependabot in #342
  • Bump docker/build-push-action from 6.7.0 to 6.8.0 by @dependabot in #343
  • Bump docker/build-push-action from 6.8.0 to 6.9.0 by @dependabot in #344
  • Bump docker/setup-buildx-action from 3.6.1 to 3.7.0 by @dependabot in #345
  • Bump docker/setup-buildx-action from 3.7.0 to 3.7.1 by @dependabot in #346
  • Improvements to GenotypeConcordance annotation by @bbimber in #347

Full Changelog: 1.3.76...1.3.77

Contributors

bbimber and dependabot
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